Scaffold and Q+S
Scaffold and Scaffold Q+S come with a built-in batch functionality that allows users to queue up multiple jobs and run them without any intervention. Scaffold relies on an XML formatted driver file known as a SCAFML.
For information on starting with Scaffold batch check out our Scaffold Batch Getting Started Guide
A detailed description of a SCAFML file can be found in our Scaffold Batch Annotated SCAFML
Finally, our legacy Batch User Guide has information related to running Scaffold in batch mode for Scaffold 4.
Scaffold DIA can also be run in batch mode using a workflow file derived from the program. More information can be found in the Scaffold DIA User Guide.